Topological RNA Structures
Presenter
December 10, 2013
Keywords:
- Structure, topological
MSC:
- 46H20
Abstract
In this talk we introduce the basic construction of topological RNA structures.
We introduce shapes and the associated shape polynomial and its connection to
RNA folding. We then establish the connection to unicellular maps and outline
the combinatorial constructions that facilitate genus induction. We furthermore
show applications of this framework to the uniform generation of RNA structures
of fixed topological genus and how to deal with RNA-RNA interaction structures.